FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002296480

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002296480
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59
Sequences flagged as poor quality0
Sequence length75
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCACCAGCAGCGGGTAGCCGGCAA46.779661016949152No Hit
CAGTGACATGTATTCCCCCTCTTACCTTAAGGCTGTGATTCTTTCTCTCTTCTTTTTTCTTCCTGGCAGTATTAT46.779661016949152No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGTTATCAGCCAAGC23.389830508474576No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT23.389830508474576No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCGCCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT23.389830508474576No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT23.389830508474576No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCACAGCAATAAGCTGGAGGACCGCATTGACTACCTGA23.389830508474576No Hit
CCTGACTCACGTTTCCTTATTGCTGGGATGTTCACAGAGCCAACGTCCTGGAAGGCGGGGACCCAACCTTCCCAC23.389830508474576No Hit
CAAGCAATCAAGGCCAGGCTACCCTGCAGCCCTTGCCGCCTTCCCATAGGCAGCACTCTGCACAGCATCATCCAT11.694915254237288No Hit
GTAAAAGTTGAAATGTCAGGGCCAGGCACAGTTTTGACTAGACAAAACCACTGCTGCAGAACTTGATAGCCACAC11.694915254237288No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGTCTGTGGTAGGGCCGGGGCACCAGCAGCGGGTAGCCGGCAA11.694915254237288No Hit
AAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCGCCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT11.694915254237288No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCTCGAAGGGGCCCTG11.694915254237288No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGCACGTCTGTGTTGTTATCAGCCAAGC11.694915254237288No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG11.694915254237288No Hit
CAGTGACATGTATTCCCCCTCTTACCTGAAGGCTGTGATTCTTTCTCTCTTCTTTTTTCTTCCTAGCAGTATTAT11.694915254237288No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCAACCACTCGGAAGAAGTAGG11.694915254237288No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGTTATCAGCCAAGT11.694915254237288No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCATACGCAGCACTCTGCACAGCATCATCCAT11.694915254237288No Hit
CTTTGCCAGCATCACGAGTTTCACCGGGATCACCAATTCCATACTCATTTTCAGCAAACACTCGGAAGAAGTAGG11.694915254237288No Hit
CAAGCAATCACGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCGTAAGCAGCACTCTGCACAGCATCATCCAT11.694915254237288No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTTTCGCTCTGTCCACTCTTAACGGCCCC11.694915254237288No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCGCCTTCCCATAAGCATCACTCTGCACATCATCCTCCCT11.694915254237288No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGTTATCAGCCACGC11.694915254237288No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTACAATCAGCACCCTTTCAACAACTCCTGTT11.694915254237288No Hit
ATGCTCAGTTGTAGGTGATTCTCACTTTACAACTTTTGATGGTCGACATTATTCTTTTATTGGCATGTGCCAATA11.694915254237288No Hit
AACTTTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGTTATCATCCAAGC11.694915254237288No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCGCCTTCCCATAAGCAGCACTCTGCACATCATCATCCAT11.694915254237288No Hit
AAAGTCTCTGACGTGGATGAGTTTGGGAGTGTGGAAGCTCAGGAGGAGAAAAAACGGAGTGGTGCCATTCAGGTA11.694915254237288No Hit
ACATCAGCCTCTTTATTCTCAGCATTGAAAAAAGCCACCGCAGCAATAATCTGGAGGACCGCATTGACTACCTGA11.694915254237288No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCAAACACGCGGAAGAAGTAGG11.694915254237288No Hit
AACTGTAGCTTCCACTGACTCCGTGGACCAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGTTATCAGCCACGC11.694915254237288No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGTCGCTCTGTCCACTCTTAACGGCCCC11.694915254237288No Hit
ACCTTCTCTGACGTGGATGAGTTTGGGAGTGTGGAAGCTCAGGAAGAGAAACAACGGAGTGGTGCCATTCAAGTA11.694915254237288No Hit
AAATGTAGCTTACACTGACGCCGTGGAACAGTGTCGACCAAATGAGACGAACGGCAGAGTTGGTATAAGCCAAGT11.694915254237288No Hit
ATAGCAGAATCATCGTGGTCTCCAGAAGTGCCCACGTTGCTCTTGCCGCTCCCCCTGCACCANGGGAAGCAGTGG11.694915254237288No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGNTATCAGCCAAGT11.694915254237288No Hit
GGCTGTGGTGTGAGTCCGGGTGGCGGCCGTAGCGCGCCATTTGCACCCGCAGCTCGCGGCCGTCCAGCACGGCCC11.694915254237288No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGTTATCAGACAAGC11.694915254237288No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGGCGGTGTTGTTATCAGCCAAGC11.694915254237288No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGACACCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT11.694915254237288No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCGTGTAGAGCAGCGTGAAGATGCCGAT11.694915254237288No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCAAACACTCGGAAGAAGTAGG11.694915254237288No Hit
AACTGTAGCTTACACTGACTCCGTGGAACCGTTTCTCCCCAATGAGACGCACGTCTGTGTTGTTATCAGCCAAGC11.694915254237288No Hit
GAAGATGCTGATTCTCTTGCAGGAACTCACCCACTCAGCCTGCAAAGCTTTCAGAATGGCCGGGATGCTGGTGGC11.694915254237288No Hit
CCTGACTCACGTTTCCTTATTGCTGGGATGTTCACAGAGCCAACGTCCTGGAAGGCTGGGACCCAACCTTCCCAC11.694915254237288No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCGGGGCGGCAGGTGGGGCGGGAGGCTGCGCGGGGCCCGCGCCCC11.694915254237288No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)