FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002296520

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002296520
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20207
Sequences flagged as poor quality0
Sequence length150
%GC58

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGC1736285.92072054238629No Hit
CAACCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC3111.5390706190923937No Hit
GTCATTGTCACTGGTCAGCTCTAGCACCTTCTGCTGCGTCTCCACGTTGC2391.1827584500420647No Hit
GGTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTG2171.0738852872766862No Hit
CAAGCAATCAAGGCCAGTCTCTTATACACATCTCCGAGCCCACGAGACGA1120.5542633740782896No Hit
CAAGCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC940.4651853318157074No Hit
AAAGTCTCTGACCAATCTGTCTCTTATACACATCTCCGAGCCCACGAGAC880.43549265106151336No Hit
AAACTCCCTGACCAATCTGTCTCTTATACACATCTCCGAGCCCACGAGAC880.43549265106151336No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCCCCACGTTGC580.28702924729054285No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGTGTCTCCACGTTGC360.17815608452516454No Hit
GTCATTATCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGC270.1336170633938734No Hit
GTCATTGTCACTGGTCAGCCCCAGCACCTTCTGCTGCGTCTCCACGTTGC270.1336170633938734No Hit
TCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCG250.12371950314247539No Hit
GTCATTGTACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCG240.11877072301677637No Hit
ATCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGC240.11877072301677637No Hit
GTCATTGTCATGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCG230.11382194289107735No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCCGCGTCTCCACGTTGC220.10887316276537834No Hit
GTCATTGTCACTGGTCAACTCCAGCACCTTCTGCTGCGTCTCCACGTTGC210.10392438263967932No Hit
GTCATTGTCACTGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCG210.10392438263967932No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)