FastQCFastQC Report
Wed 31 Aug 2022
EGAF00002296659

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002296659
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8
Sequences flagged as poor quality0
Sequence length75
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTTCTGCTGCCCGCACTGGAACTGTGCTTTTCTCAGTCACAATTTTGTACCCATTTGAGTTTTGCACAATGCGT112.5No Hit
GTCAGGAACTGCTGAATCAGTTTGCTTGGGTTAGGGCCTCTGATAAAACTGGCGATGTATACATTGACAAAGGTG112.5No Hit
AATTTGACCCAACACGGGAAACCTCACCCGGCCCGGACACGGACAGGATTGACCTGTCTCTTATACACATCTCCG112.5No Hit
CTCCTGGACTGATGGCTTCTTCAGGAACACTGAGAGAATGTAAAATACAGGAATCCTGATAATCCTGCATTCCTG112.5No Hit
GCCATGGTGCGAGCGAAGGGAGGAAGAGCAGAGGGAGCGAGGGTGGCTGCACCAGCGCGGGGGCTGCGACGGCGG112.5No Hit
GTTCTGGGCTGGCACAGTGACTTCACATGGGGCAATGGCACCAGCACGGGCAGCAGCTGGCACCTTATTGGCCAG112.5No Hit
GCTCTCAAAGACCTTCCAGTCTATGGTCTCCATGGTGTTCTTAAGGTGTCTCAGGTTCTCCGGGAAGCTCCCCTT112.5No Hit
TGAAGAAACCTTGGAATGACACATGAAGCATGATAGGAAAGTCATTCTGAGGCAGGATGCTTTACTGAATTGTTT112.5No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)