FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002296742

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002296742
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4780
Sequences flagged as poor quality0
Sequence length150
%GC58

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGC383780.27196652719665No Hit
GGTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTG571.1924686192468619No Hit
GTCATTGTCACTGGTCAGCTCCAACACCTTCTGCTGCGTCTCCACGTTGC430.8995815899581591No Hit
AACTGTAGCTTACACTGACTCCGAGCCCACGAGACGTTGGAAGATCTCGT240.502092050209205No Hit
GTCATTGTCACTGGTCAGCTCCAGTACCTTCTGCTGCGTCTCCACGTTGC240.502092050209205No Hit
GTCATTTTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGC190.39748953974895396No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCGGGGCGGCAGGTGGGGCG150.3138075313807531No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCCCCACGTTGC140.2928870292887029No Hit
AACTGTAGCTTACACTGACTCCGAGCCCACGAGACGATGCACAATCTCGT140.2928870292887029No Hit
ATCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGC140.2928870292887029No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTCTGCTGCGTCTCCACGTTGCG130.2719665271966527No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGT130.2719665271966527No Hit
GTCATTGTCATGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCG120.2510460251046025No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCG120.2510460251046025No Hit
GGCTGTGGTGTGAGTCCGGGTGGCGGCCGTAGCGCGCCATTTGCACCCGC120.2510460251046025No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGTGTCTCCACGTTGC120.2510460251046025No Hit
GTCATTATCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGC110.23012552301255232No Hit
GTCATTGTCACTGGTCAGCCCCAGCACCTTCTGCTGCGTCTCCACGTTGC90.18828451882845187No Hit
GCACAGGTCGTATACGCATCTCCGAGCCCACGAGACGATGCACAATCTCG80.16736401673640167No Hit
GTCATTGTCACTGGTCAGCTCCAGCAACTCTGCTGCGTCTCCACGTTGCG80.16736401673640167No Hit
AACTGTAGCTTACACTGACTCCGAGCCCACGAGACGTGCATTCATCTCGT80.16736401673640167No Hit
CAACCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC80.16736401673640167No Hit
AACTGTAGCTTACACATCTCCGAGCCCACGAGACGATGCACAATCTCGTA80.16736401673640167No Hit
GTCATTGTACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCG80.16736401673640167No Hit
GTCATTGTCACTGGTCAGCTTCAGCACCTTCTGCTGCGTCTCCACGTTGC80.16736401673640167No Hit
GTCATTGTCACTGGTTAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGC70.14644351464435146No Hit
CCTGACTCACGTTTCCGAGCCCACGAGACGTTGGAAGATCTCGTATGCCG70.14644351464435146No Hit
GTCATGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCG70.14644351464435146No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCG70.14644351464435146No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGT70.14644351464435146No Hit
GTCATTGTCACTGGTCCGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGC70.14644351464435146No Hit
TCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCG60.12552301255230125No Hit
GTCATTGTCCCTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGC60.12552301255230125No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCCCGTTGC60.12552301255230125No Hit
GTCATTGTCACTGGTCAGCTCCAGCAACTTCTGCTGCGTCTCCACGTTGC60.12552301255230125No Hit
GCCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGC60.12552301255230125No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCATGTTGC60.12552301255230125No Hit
GTCCTTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGC60.12552301255230125No Hit
GTCATTGTCACTGGTCAGCTACAGCACCTTCTGCTGCGTCTCCACGTTGC60.12552301255230125No Hit
GTCATTTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCG50.10460251046025104No Hit
GTTTCCAGGTCAAGGGTAACGGAGCGTGGACCAAGTCCCGCGTCTCCTCC50.10460251046025104No Hit
AACTGTAGCTTACACTGACTCCGAGCCCACGAGACAACCAACGATCTCGT50.10460251046025104No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGCCTCCACGTTGC50.10460251046025104No Hit
GGCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGC50.10460251046025104No Hit
CCTGACTCACGTTTCCGAGCCCACGAGACAACCAACGATCTCGTATGCCG50.10460251046025104No Hit
GTCATTGTAACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGC50.10460251046025104No Hit
CAAGCAATCAAGGCCAGTCTCTTATACACATCTCCGAGCCCACGAGACGA50.10460251046025104No Hit
GTCATTGTCACGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCG50.10460251046025104No Hit
CAAGCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC50.10460251046025104No Hit
GTCATTGTCACTGGTCAACTCCAGCACCTTCTGCTGCGTCTCCACGTTGC50.10460251046025104No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)