FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002296750

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002296750
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5270
Sequences flagged as poor quality0
Sequence length150
%GC58

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGC431381.84060721062619No Hit
GGTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTG611.157495256166983No Hit
CAACCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC510.967741935483871No Hit
CAAGCAATCAAGGCCAGTCTCTTATACACATCTCCGAGCCCACGAGACAA340.6451612903225806No Hit
GTCATTGTCACTGGTCAGCCCCAGCACCTTCTGCTGCGTCTCCACGTTGC210.39848197343453506No Hit
CCTGACTCACATCTCCGAGCCCACGAGACAACCAACGATCTCGTATGCCG180.3415559772296015No Hit
GTCATTTTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGC180.3415559772296015No Hit
GTCATTATCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGC150.2846299810246679No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCCCCACGTTGC150.2846299810246679No Hit
ATCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGC150.2846299810246679No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGTGTCTCCACGTTGC140.2656546489563567No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCGGGGCGGCAGGTGGGGCG140.2656546489563567No Hit
AACTGTAGCTTACACTGACTCCGAGCCCACGAGACAACCAACGATCTCGT120.22770398481973433No Hit
AACTGTAGCTTACACATCTCCGAGCCCACGAGACAACCAACGATCTCGTA110.20872865275142313No Hit
CAAGCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC110.20872865275142313No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTTCACGTTGC90.17077798861480076No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGCCTCCACGTTGC90.17077798861480076No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTCGC80.15180265654648956No Hit
GTCATTGTCACTAGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGC80.15180265654648956No Hit
GTCATTGTCCCTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGC70.13282732447817835No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCCGCGTCTCCACGTTGC70.13282732447817835No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTTTCCACGTTGC70.13282732447817835No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCAACGTTGC70.13282732447817835No Hit
GTCATTGTCATGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCG60.11385199240986717No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTACACGTTGC60.11385199240986717No Hit
GTCATTGTCACTGGTCAGCTCCAGCAACTTCTGCTGCGTCTCCACGTTGC60.11385199240986717No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCTTCTCCACGTTGC60.11385199240986717No Hit
GTCATTGTCACTGGTCAGCTCCAGCCCCTTCTGCTGCGTCTCCACGTTGC60.11385199240986717No Hit
GTCATTGTCACTGGTCAGCTCCAACACCTTCTGCTGCGTCTCCACGTTGC60.11385199240986717No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTATCCACGTTGC60.11385199240986717No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCAAGTTGC60.11385199240986717No Hit
GTCATTGTCACTGGTCAACTCCAGCACCTTCTGCTGCGTCTCCACGTTGC60.11385199240986717No Hit
GTCATTGTCACTGTTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGC60.11385199240986717No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)