FastQCFastQC Report
Wed 31 Aug 2022
EGAF00002296886

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002296886
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32
Sequences flagged as poor quality0
Sequence length75
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTCGCGTCTGGGGCATAGCTGGCGTGGGTCTTGCCGGCCCCGCTCCAGCGTGGGCATCCGGTCATAGGCCAGCT26.25No Hit
GAGCCTCTGTCTTTCGGCCTCCTCCCCATGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGAGCCCAC13.125No Hit
GTATTTGCAGACAGAGCCACTGCCTTTGCTGCCACATTTTGCTTGGTTATTGTGCTGTCTCTTATACACATCTCC13.125No Hit
CTCCTGGGCTGTCTCTGGTCTGGTCAGCCTGGCTCTCGGGAAATTCAGCCATGAGCAGGGAAAGAACTCTCCCAA13.125No Hit
GGGCTACAGTGCTTACACCGCCCAGCCCACTCAAGGATATGCACAGACCACCCAGGCATATGGGCAACAAAGCTA13.125No Hit
CATCAATGTAGAACTCAGCCTTCTTGGAAAGAAAAAAAAGAGGCTCCGGGTTGACAAATGGTGGGGTAACAGCTG13.125No Hit
GGTATCAACGCAGAGTACATGGGCGGCAGTGCAGCAGTAGATTTATGTACAAGTCAATAATTCTCAACTGGCACG13.125No Hit
ATGTAATCTACACCACACTTGAATGCTCTTCTCCAACTTGAGTCAGAAGACCATGTATGGTCTGTCTCTTATACA13.125No Hit
GTATTCCACGACACAATGCCATTCATTTTTACACAAAATCTCACCACAATTCACACAGAGATAGTCTGGAACCCA13.125No Hit
GCTTACACACTGGGTGTGAAACAACTAATTGTCGGTGTTAACAAAATGGATTCCACTGAGCCACCCTACAGCCTG13.125No Hit
GATGTGCCCGTTGCTGGACTGGATTATCAGGCGCTCCAGCTCGGGCGACGCCAGCTTGAGCAGCCCCTGTCTCTT13.125No Hit
ATCAACGCAGAGTACATGGGCGGCAGTGCAGCAGTAGCTGTCTCTTATACACATCTCCGAGCCCACGAGACATCT13.125No Hit
CCCTATAGTGAGTCGTATTACTGCCCATGTACTCTGCGTTGCTGTCTCTTATACACATCTCCGAGCCCACGAGAC13.125No Hit
CATAGGCATCGAAGACGCTCGCTTCAGAAATGTCCCTGACTGCTGCGGCCTCCACTATGTTTCGAATGACGAATT13.125No Hit
TTATTTAGTACTAATCACCATGTAATATTATATTATACACGTTAGCTTATACAACTATAATATCACAAGCTACCA13.125No Hit
GAGTACATGGGGAGGAGGCCGAAAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACATCTCAGGATCTCG13.125No Hit
CCCTCATCTTCTAGACACAGGCGGTCAAGAAGCAGATCGAGACGGCGGTCACATTCTAAGTCTAGGAGTCGGCGA13.125No Hit
GTATCAACGCAGAGTACATGGGGGTTACAAGTTCCAAGACTATCTCTGTGTGAATTGTGGTGAGATTTCTGTCTC13.125No Hit
CAAGTAGTGTGTCTCCATAGCTGGAAGATTCCACTGAGTGTTCTGGTGATGCCACACTGGGACTTGTGTTTAGTG13.125No Hit
GTACATGGGGGGGGGGACACTTTCGGACATCTGGTCGACCTCCAGCATCGGGGGAAAAAAAAACTGTCTCTTATA13.125No Hit
GGTATCAACGCAGAGTACATGGGTGAGTGGGTGAAATGGATATAATAACAAATTGAGATTATACACAGAACCGAG13.125No Hit
ACATTAGCCAGGCTGGTCTTGAACTCCCATGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGAGCCCA13.125No Hit
GGAAAAAGGGAGAAGCCAGACCTAAATGTTTTACAGAAAACCTGTGTAAAAGAGAAACCCTACAAATGTCAGGAA13.125No Hit
GAACAAAGCCAAGGGCCACGGTCCCAGGGCCCTAGGTCTGCCTGAGCCTCCCACTCCCCAGTGGTGGCGGCACTG13.125No Hit
CCACCTGCCTCCGCCCTGCCAGGACGGCATCTGCCAGCTGCTGGTTCTCGGCCTCCTGTTTCTGCACATGGCGCC13.125No Hit
GTATCAACGCAGAGTACATGGGGCAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCCTGACTCTTATACACATCTC13.125No Hit
AACTAGTACAGCTCAGCAAGGGACTCCCAGTATTGCTGGCCCTTGGGTGTCCCTGGCATTGGGTAGATGACCCCC13.125No Hit
GGGTCATCTCCACAACATTCCATTTATACACAGAACTAAACAGACAAGCACAGAGTCACTATTGCGGTTAGAAGT13.125No Hit
GGTATCAACGCAGAGTACATGGGCGGCAGTGCAGAAGAAGAAGTCTGGAATATACACGCAGTATCTCTGCTACCA13.125No Hit
GTATCAACGCAGAGTACATGGGCAGTAGGACGAAACACATAGGCTCGTTTCAGATCGACACAGATAAAAACAACA13.125No Hit
GGAGAGGCAGGCGCAAGGGCTTGTCAGTTGGACGAGTTGGTGGTAGGATGCAGTCAAGAGCCTCAAGCAGCGTGG13.125No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)