FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002296911

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002296911
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences97
Sequences flagged as poor quality0
Sequence length75
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTTGGTTGAGCATGCCGACCTGATGCGCTACTGCCCCGTTTGTGACGGCTATGAGCACACGGGCAAGCGCATC11.0309278350515463No Hit
CAATTGACGTTACCCCCATGTACTCTGCGTTGATACCTGTCTCTTATACACATCTGACGCTGCCGACGAATAGCC11.0309278350515463No Hit
CCTTTACAAGCTGTGAGAGACACATCAGAGCCCTGGGCACTGTCACTGCCTGGGGTAGAACAAAAACCTGTCTCT11.0309278350515463No Hit
GCATTGAGCAGCTGCTGGAAGCTCTCAACCTCTTTGCTGTCATCTGCAGCCCGCTCCATCAGCACACCCAGCATC11.0309278350515463No Hit
CCACCGGATCAACTTCGACAAATACCACCCAGGCTACTTTGGGAAAGTTGGTATGAAGCATTACCACTTAAAGCT11.0309278350515463No Hit
GTCAGATCCTTTGGCATCCGGAGAAATGAAAAGATTGCTGTCCACTGCACAGTTCGAGGGGCCAAGGCAGAAGAC11.0309278350515463No Hit
GTATCAACGCAGAGTACATGGGATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCATAGA11.0309278350515463No Hit
GTTTAACCCGAGTCATTTTGTAGTAGAATTCATCTGGATTTTTTTCAAGAGCCTTCTTCCGAAGAGCTTTGAGGC11.0309278350515463No Hit
GGCCTGTCCAACAAGCTGATCGCGCGGGAGCTGGGCGTCAGCGTCGACACGGTCAAGGACCTGTCTCTTATACAC11.0309278350515463No Hit
CCCTTGTGCTGTGTGGAGACCTCAATGTGGCACATGAAGAAATTGACCTTCGCAACCCCAAGGGGAACAAAAAGA11.0309278350515463No Hit
GGCACAGTGGTTCACGCCTGCAATCCCAGCACTTTGGGAGACTGAGGCAGCCAGATCTCTTGAACCCAGGAGTTC11.0309278350515463No Hit
GCAAGAGCACTACCAGCAATCAACTCGTCTATGGGACCGGTCTGATAGTCACTGCTGACGCTGCCGACGAAGAGG11.0309278350515463No Hit
GAGAAGGCCCGCTGGTGGCGAAGCGGCGGAAACGGCCTGAGCGATGGTCACCCAGTCTTAGAGCGGGGGTGTGTC11.0309278350515463No Hit
CAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA11.0309278350515463No Hit
CAGCAACACCACGGCGTGGTAGGCGCCGGCCAGCAGGCGGCCGCGGAGCTCGGCGTTGGGCACGATGTGCTCCAG11.0309278350515463No Hit
GGTATCAACGCAGAGTACATGGGAGGTTACAAGTTCCAGACTATCTCTGTGTGAATTGTGGTGAGATTTTGTGCT11.0309278350515463No Hit
CTGAAACCCGTGGCCTGGCAGATGAGCTTGGACTTGCGGGGGTTGCCGAAGAAGCCGTCGCGGGGTGGGACGAAG11.0309278350515463No Hit
AGGTAACTGCCAACTGTCCTCATTACAGTAAAGATCAGGATCTGCCCCACTGGAGAGCAAAAGCTCCACACATTT11.0309278350515463No Hit
TATCAACGCAGAGTACATGGGGAGAGATGCGACGGCCGAGGCTCCCAGCTCAAGCTTCTGGTAGTAAGGCCTGTG11.0309278350515463No Hit
CATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTAAAAACGCAGATTACATGCTAAGCATTCG11.0309278350515463Clontech Universal Primer Mix Long (96% over 26bp)
CTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCTTTGCAACCATACTCCCCCCGGAACCCAAAGACT11.0309278350515463No Hit
ATACAGGCCACCTTGCGCAGGCCTCGGTGGGTCTTGCGGGGCAGCTTCTTGGTGCTGTCTCTTATACACATCTGA11.0309278350515463No Hit
CATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCTGTCT11.0309278350515463Clontech Universal Primer Mix Long (96% over 26bp)
AGCACAGCCTCCCCTTACTGTCGCAGGACTAAAAGTGACACAGAACCCCAGAAGTCTCAGCAGAGCTCTGGAAGG11.0309278350515463No Hit
GGGTTTCATCCATCCGACATTGAAGTTGACTTACTGAAGAATGGAGAGAGAATTGAAAAAGTGGAGCATTCAGAC11.0309278350515463No Hit
GCTGAGATGGGAAAGGGCTCCTTCAAGTATGCCTGGGTCTTGGATAAACTGAAAGCTGAGCGTGAACGTGGTATC11.0309278350515463No Hit
CCTGAAGAAGGGCCACACTGGCCGAGTGGGGTGACTCTTGCTTGTAATCCCAGCACTTTGGGAGGCGGAGGCGGG11.0309278350515463No Hit
CGTGTATTCAGACATAGACCTGAAGAAGCTGGCTGAAATACGCCAGCAAATCCCCGTTTTTAGACAGAAGCGATC11.0309278350515463No Hit
GCTCTATGGAGCACAACAGTCTTCCCAGACCAGTGGGGAACCCAGGCACGAAGCTGAGCTGAGGCAGCAGTGCTG11.0309278350515463No Hit
ATTTCTTCTTCATGGTGTTTTTTCAAAGCTGCCAGTTGTTCTCTACTCTGTGCTCGGAAATATCGTTCCTCTTCA11.0309278350515463No Hit
CTCACAGGATCCTGAGCTGCACTTACCTGTGAGAGTCTTCAAACTTTTAAACCTTGCCAGTCAGGACTTTTGCTG11.0309278350515463No Hit
CATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTAAAAACTCAGAGTACAAGCGAACCAGTCG11.0309278350515463Clontech Universal Primer Mix Long (96% over 26bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGG11.0309278350515463No Hit
CCTGTGTCTCAACCCAGAGCTTCTGATTTAGTTGGTCTGGAGTGAGGCCTGGATGTTGTTTTTTGTTCTGTCTGT11.0309278350515463No Hit
GGTATCAACGCAGAGTACATGGGGAGCTCTGTGGGCACAGGTAGGGAGGCTGCAGAAAGCTGCCTTTGAACTGGG11.0309278350515463No Hit
AGTTTAAATGACTGTGCTGCCCCTTTCACATCAAAGAACTACTGACAACGAAGGCCGCGCCTGCCTTTCCCATCT11.0309278350515463No Hit
TCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGCAATAACAGGTCTGTGATGCCCTTAGACTGTCTCT11.0309278350515463No Hit
GCCAGAGCACCATGGAAAACCATTAAGTGGTCTAAACGGTGGCTTGACTGAAATTTCACACTCTAGGTCCTTCTT11.0309278350515463No Hit
AACCTGCTCCACCAAAACCTGAACCCAAACCAAGAAAAACATCTGCTAAGAAAGAACCTGGAGCAAAGATTAGCC11.0309278350515463No Hit
GCTCCAGCCGCCTCCTCCGCGCAGCCGCCGCCTCAGCTGCTCGCTCTGTGGGTCGGTCCTCTCCGGCACTTGGGC11.0309278350515463No Hit
GAAGGGTTCGGTCGCCCCGAGGCGGGGAAAGCGAGGAGGAGCTCGTGCATCCCCTTGATATCGCAAGCGGCTGCT11.0309278350515463No Hit
CCCAACAAATCACACATGGATAGGATGCACATTTTCACTACAAAGGAATCAGCGTTTATACAATGTCTATTATTC11.0309278350515463No Hit
GACATGTTCCGCTTGGACCCCACTGTGCCTCCCTTGCCCTTCAGAGAAGAGGCTGTCTCTTATACACATCTGACG11.0309278350515463No Hit
GTACATGGGGAGGAGGCCGAAAGACAGAGGCTCGGTTCCGAGCCTGTCTCTTATACACATCTGACGCTGCCGACG11.0309278350515463No Hit
GCTCGGAACCGAGCCTCTGTCTTTCGGCCTCCTCCCCATGTACTCTGCGTTGATACCTGTCTCTTATACACATCT11.0309278350515463No Hit
CCTTATTGGCCAGCAACATGTCCCTGATCTCAGTGAGGTCCTCCTCTGTCTCTTATACACATCTGACGCTGCCGA11.0309278350515463No Hit
GTGTTAGGAAGATATAAACGTAGAGAGCGAGTAACAGGAGGCAATTCCACGGCCAAACAGGTTTATTTACAGGAA11.0309278350515463No Hit
GGTATCAACGCAGAGTACATGGGAGTGTCTTCCACTCGGTGCGTCTCTCTAGGAGCCGCGCGGGAAGGATGCTGC11.0309278350515463No Hit
AACCTGTACTTCCAGAGCGGAAGCGAGCCCAAGAGCTGCGACAAGACCCACACCCCCATGTCTGTCTCTTATACA11.0309278350515463No Hit
GAACCCCAGCAATCCCTTCCTTTCACTACCTTCTTTTTGGGGGTAGTTGGAAGGGACTGAAATTGTGGGGGGAAG11.0309278350515463No Hit
CAATAGCACCAAGGCAGCGTGGGACTCCATCCAGTCATTTCTGCAGTGTTGTGGTACTGTCTCTTATACACATCT11.0309278350515463No Hit
CAATTGGAGGCTGCAGTGAGCCATGATCCACCACTGCACATCAGAATGGGCAACAGAACAAGACCTGTCTCTTAT11.0309278350515463No Hit
GTATCAACGCAGAGTACATGGGGATGCGAAAACATGGCTGCGGCCGGTTTGGCCCTTCTTTGTAGGAGAGTTTCA11.0309278350515463No Hit
AAGCTGCACTTCAGGTCTCTTGGAAGGGAATGAGACGAATTATCAATAAACACACTGATGAGTCTTTAGGTGACT11.0309278350515463No Hit
AACACAGGGAACATCCCTGAAGAATGCTGGGAACTGCCTAAGCCCCGCAGTCATTGTCTGCCTCCTGAAAGAGGC11.0309278350515463No Hit
GGGTTAGGGTATACTGGATTGGGGCCCGGGAATTCTGTTGGGGGATGGGGCGCCCAAGGCACCAGGTAGGAACGC11.0309278350515463No Hit
GGGTAAGAGAGACCTAAGCCAGCTCCTAGACCCTTGCCTGAGGAAATCAGTCCACCAGTGTAGAGGGCCTCCCTT11.0309278350515463No Hit
ATTCTGATCTTTTCAGGCACTTTTGCCTGAGACTACTCTGCCCAGCATGGAAAAGCTTCACAGAAACACGTAGCA11.0309278350515463No Hit
CCCAGTTTCTCATCGGGCACATGAGGCGTGTCATCACCAGTCCAGAGAATGAAGTCTGGCTCTGGCTCAATCCTG11.0309278350515463No Hit
CATTTCTTGTTGATCAAACCACCGTGGACACCTTCTTTGCCCATCAGCAGGACTAGCGTCTTGTCAGTCTTGGTG11.0309278350515463No Hit
GAAGGAGCTAACCACAAAAACGGTGCAGGCAGGTCCCAGAAGCAGGAGAAGGCCGAGAAGAAGGTCCCGGAGGTT11.0309278350515463No Hit
GCCTTACCCTAGGCAATTCTCACCACACATCCTGGTAGTTGGGTCGATTACATTTATTATGTTGTCTTTTTTGTA11.0309278350515463No Hit
CTATGGGCTTTAAGCGCCGCGGAGACAAGCGCTTCCCGCCTGGGTGGCGCACTCTGCGCTGTCTCTTATACACAT11.0309278350515463No Hit
GCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCCTGTCTCTTA11.0309278350515463No Hit
GTGGTAATTGGAACAATGCAACTACCACCACGCAACTGATACTCTCCTGTCTCTTATACACATCTGACGCTGCCG11.0309278350515463No Hit
GTCAGTTACATCCGAAAGTGTCTGGAGAAGCTGGACACTGACATTTCACTCATTCGCTATTTTGTCACTGAGGTG11.0309278350515463No Hit
ATCCAACTACGAGCTTTTTAACTGCAGCAACTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCA11.0309278350515463No Hit
GTGCCGGACTGAGACTGTGCGATGACATCTCTCCCTTTGATGATCTGCTTGATTGCTCGTTGCTGGATTGCTGCT11.0309278350515463No Hit
CTCTGATTGCGCCCTTTTCAATGCAACCAAAACTGCATGAGTTTTTGATCTGTCTCTTATACACATCTGACGCTG11.0309278350515463No Hit
AGGGAGGAACTTCCACCAAACTTCCCTAGTGAAATCCCCGGAATCTGCCATTTTCTGGATGCTTACCAACCTGTC11.0309278350515463No Hit
CTTAGATCTGCAGTTGGGCTCAACGCACTCAAGCCTTAGCACAATCTTCTTTGTAGTTTTAGCCTTTTTCCGGAA11.0309278350515463No Hit
CCCATCACGAATGGGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGT11.0309278350515463No Hit
GTGAGAAAGCTCTTTACTGGGGGTACAGCGAGGAGGAGCAAGGCCATGGGGCCCGGCCGGGGGGCCCCCCCGGCG11.0309278350515463No Hit
TCCCATAACCCTCCACCTGCTTCCAGATCGCGACAATGACAAAAGCCTCCGTCAATTCCGGTACACTTTCCAGGC11.0309278350515463No Hit
GGCAGTACTTCTTCATGCTGCTGAAGTCCTTCTCCAGCTGCTTCTTGCCATCCTCATCCTGCCATTTCTTGCAGT11.0309278350515463No Hit
CCTTCACCGTCTCGTAGCACGGCGCCTTCCACCAGGTGCCGGGGGCGTGCAGCCCACAGCTCTCACTGAACTCCA11.0309278350515463No Hit
CTTTTGCTTCTGAAGGCAGTTTTGATGGCTTGTCTTTTCAAAAATGTTTTCAGAAGCTTCTCTGTCGTTTTCCTG11.0309278350515463No Hit
CCCCAGTACCCCCCACTCAGGAATTTGCTTCAGGCCAAAAGCCCAGGGCAGCAGGGTAAGGCGCCATCGGCCAGG11.0309278350515463No Hit
GTTCACAATATCTGGTCGAATAGGAGCCTTGAATACAGCAGGCAAAGTGACATTTTTGCCAGATGACTCCCCCTT11.0309278350515463No Hit
GTTCTGAGACCGTTCTTCCACCACTGATTAAGAGTGGGGTGGCAGGTATTAGGGATAATATTCATTTAGCCTTCT11.0309278350515463No Hit
GGACAAGGCCGAGAAGCTCAAGTCTTTAATGGCCTCGGAGGTGGATGATCACCATGCGGCCATAGAGCGGCGGAA11.0309278350515463No Hit
AGCAAGATCATCATCGTCAATCGTAATCGGGAAGAGATGTTGCTCAACTCAGACATCTTCTGGAACTGTCTCTTA11.0309278350515463No Hit
AGTAAACGCTTCGGGCCCCGCGGGACACTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGCTG11.0309278350515463No Hit
GAACAGAGACGGCAAAAAGAACACAGGCATTATCAGCCATTCTCTCAGACGAATAGTAATTACCGATGACTTCAT11.0309278350515463No Hit
ACATCCAGTGAAAGATTTGAGCTTGAAAGAAATGGAAGACGCTGAACCTGCTGCACTGCATTGAATTCCTGTCTC11.0309278350515463No Hit
GTATCAACGCAGAGTACATGGGCAGTAATACGACTCACTATAGGGAGAAGGCTCCTGTCTCTTATACACATCTGA11.0309278350515463Clontech Universal Primer Mix Short (95% over 21bp)
GCTGCTGCCCCTGCCTCAGAGGATGAGGACGATGAGGATGACGAAGATGATGAGGATGACGATGACGATGAGGAA11.0309278350515463No Hit
GGAACACACCGAGCCGCTACCGAACGGGGGAGTCGAAACCAGGTCTGGAAGGCTCATGGACATCTCCTTAAGTCC11.0309278350515463No Hit
AGATTGTGTCGAAGACGATGATGCTGATAACCTCCAGGAGTCCCTGTCGGATAGTAGAGAGCTAGTCGAGGGGGA11.0309278350515463No Hit
GCTGGAGGTCGACCAGATGTCCGAAAGTGTGGGGGCCGGGGGGGGGGCGGGGGGGGGGGGCGCGGAGGCGGGGGG11.0309278350515463No Hit
GAACCTATCGGCGCCATTGCAGTTCCGCTCTAAGGAGGTGTCCAAGAGCAACGTGGTGGACGACATGGTGCAGAG11.0309278350515463No Hit
GGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGACACTCAGCCTGTCTCTTATA11.0309278350515463No Hit
GTCCTTGCCTGTGCAGGGAGGTAACTAAGATGCTGGGATAGGACCTTAAAGGCACTGAGATGCAACACCTAGTAG11.0309278350515463No Hit
CCCGGCTTCAGACTTCGGAGCCTAAAACGCCCCTGCCTCCTGGCCCGAGGCCGACGGGCCTAGAAAAAGATGCAA11.0309278350515463No Hit
AACGCAGAGTACATGGGGAAAGTAAAGGAACCCGAGATCTGCGCAGGGGTTCCCTTTGCCGATTTCTCTCACCTC11.0309278350515463No Hit
CGTCAGACCAGCGGCAGTATTAGATTCTCATAGGGGTGCAAACCCTATTGTGAACTGCACATGGAAAGGATCTAG11.0309278350515463No Hit
CCCTCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAGAGACTG11.0309278350515463No Hit

[FAIL]Adapter Content

Adapter graph