FastQCFastQC Report
Tue 13 Sep 2022
EGAF00002300324

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002300324
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8122638
Sequences flagged as poor quality0
Sequence length126
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGACGTTCGAATGGGTCGTCGCCGCCACGGGGGGCGTGCGATCGGCC100670.12393756806594114No Hit
GTGGAAGCGGCCCCCGCAGACGCTCGGCAGGTGTCTTGATATTATCATCT91380.11250039703849908No Hit
GCTGGTTGTAGGAGCAGAGGTTGTGCTGGTGGTGGGAACAGGGCTGGGAG84800.10439958053036465No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)