FastQCFastQC Report
Tue 13 Sep 2022
EGAF00002300530

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002300530
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6024525
Sequences flagged as poor quality0
Sequence length126
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGG133330.22131205364738302No Hit
GTGGAGCTGAGGGTGGAAGGGGAGTGAGCTGACGCTCGGAAGGTGTCTTG122890.20398288661761715No Hit
GTGGAAGCGGCCCCCGCAGACGCTCGGCAGGTGTCTTGATATTATCATCT108700.1804291624650906No Hit
GTCCACTTTGGGTCCTGAGACATCAATGTCAGCCTTGGGCAGGTTCACAT100870.16743228719276623No Hit
GTCTGCCTTGGCTTGCAGTTCAACCTTGTTCATGTAGGCAGCATCCACGT100460.16675173561401105No Hit
GCCTTGACCTCAGCGATGATGCTGTCCAGGTCCAGGTTGCGGTTGTTGTC95590.15866811076391915No Hit
GTCCACGTCAAGAGCCAAGCCAAGGTACTGTTCCTCCAATGAGTAAACAG95380.15831953556504455No Hit
GTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCTTCCAG91550.1519621878903316No Hit
GTCAAGAGAAAAGCCAACATGTTTTTCCTCCAATGCATAAAAGGAACTTC85780.14238466933077712No Hit
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGA85450.1418369083039742No Hit
GTGAGAGTGTCTGCCTTGGCTTGCAGTTCAACCTTGTTCATGTAGGCAGC84900.14092397325930262No Hit
GGCAGACGTTCGAATGGGTCGTCGCCGCCACGGGGGGCGTGCGATCGGCC83770.13904830671297735No Hit
CTTGAGATTATCATCCGCTGAGGGTGGAAGCGGCCCCCGCAGACGCTCGG83660.13886571970404304No Hit
CCTTGACCTCAGCGATGATGCTGTCCAGGTCCAGGTTGCGGTTGTTGTCC78130.12968657280034526No Hit
GTCTGAGATGTGGGTCTGCATCTGGGACAGCTCTGCATCATACAAGGCTC76680.12727974404621112No Hit
GCTCGAACAACGGCTCCAGGTTCTGCCTCACAGTCTTGGTGCCCTGCTCC70460.11695527863192533No Hit
GTCAAGAGCCAAGCCAAGGTACTGTTCCTCCAATGAGTAAACAGCACTGC68740.11410028176495242No Hit
CTCGGCTCCACTTCGAGAGTGATGGTCTTACCAGTCAGGGTCTTCACGAA67990.11285537034040029No Hit
CTTTGATCTTCTTCCCCTTCTTTTCTTCCCCTTCCCCTTCTTTTCAATTT67850.11262298687448387No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)