Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00002312050 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 31681725 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG | 139698 | 0.44094189947043605 | Illumina Single End PCR Primer 1 (100% over 50bp) |
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCC | 110370 | 0.3483711824403501 | Illumina Single End PCR Primer 1 (100% over 50bp) |
CAAGCAGAAGACGGCATACGAGATTCTGCTTGAGATCGGAAGAGCGTCGT | 46777 | 0.1476466322461924 | RNA PCR Primer, Index 40 (96% over 28bp) |