FastQCFastQC Report
Mon 12 Sep 2022
EGAF00002332260

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002332260
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3746342
Sequences flagged as poor quality0
Sequence length35-165
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN89770.23962040838770193No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN60320.16101039360528216No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)