FastQCFastQC Report
Tue 13 Sep 2022
EGAF00002332448

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002332448
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5156685
Sequences flagged as poor quality0
Sequence length35-165
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN112400.21796949008907854No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN82830.16062644896866882No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)