FastQCFastQC Report
Wed 1 May 2024
EGAF00002334294

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002334294
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18218668
Total Bases1.8 Gbp
Sequences flagged as poor quality0
Sequence length35-101
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN364980.2003329771419074No Hit
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN319280.175248816214226No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)