FastQCFastQC Report
Sun 5 May 2024
EGAF00002334902

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002334902
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16178894
Total Bases1.6 Gbp
Sequences flagged as poor quality0
Sequence length35-101
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN296090.18301003764534213No Hit
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN249560.15425034616086858No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)