FastQCFastQC Report
Sat 1 Apr 2023
EGAF00002372456

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002372456
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences140078459
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TAGTGCGG4272688830.502111677285086No Hit
CTCGAAAT3576098125.529250717985125No Hit
GGTATGCA3232886623.079113113316016No Hit
ACACCTTC2809794320.058717950345244No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)