FastQCFastQC Report
Mon 5 Sep 2022
EGAF00002372496

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002372496
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16969013
Sequences flagged as poor quality0
Sequence length150
%GC29

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1037090.6111669547309558No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA351180.20695369848558665No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA303310.17874345431876326No Hit
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA196740.11594074446168437No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)