FastQCFastQC Report
Mon 5 Sep 2022
EGAF00002372502

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002372502
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15807744
Sequences flagged as poor quality0
Sequence length150
%GC28

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1025850.6489540822523442No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA357730.22630047652593566No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA308980.19546116131435326No Hit
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA201050.12718449893925407No Hit
ATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA158590.10032424614163792No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)