FastQCFastQC Report
Mon 5 Sep 2022
EGAF00002372525

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002372525
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8733439
Sequences flagged as poor quality0
Sequence length151
%GC30

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT311860.35708728256990174No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT127680.14619670441391988No Hit
ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT126980.14539518739410673No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT104260.11938023497959968No Hit
TATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT90280.1033727950696169No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)