FastQCFastQC Report
Wed 15 Mar 2023
EGAF00002372582

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002372582
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24064469
Sequences flagged as poor quality0
Sequence length150
%GC32

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2109600.8766451484967318No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA495340.20583874092546983No Hit
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA335100.13925094295660545No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)