FastQCFastQC Report
Wed 15 Mar 2023
EGAF00002372596

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002372596
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29120594
Sequences flagged as poor quality0
Sequence length150
%GC31

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2107750.7238004829159735No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA511340.17559394564547687No Hit
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA342170.11750103723845744No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)