FastQCFastQC Report
Wed 15 Mar 2023
EGAF00002372708

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002372708
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31795225
Sequences flagged as poor quality0
Sequence length150
%GC32

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1108960.3487819318781358No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA416580.13101967355161034No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA357600.11246971833034677No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)