FastQCFastQC Report
Mon 5 Sep 2022
EGAF00002372799

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002372799
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22378053
Sequences flagged as poor quality0
Sequence length150
%GC31

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1368170.6113892035200739No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT768510.3434212976437226No Hit
ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT603330.26960790556711967No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGAATGCATCTCGTATGC570290.2548434396861961TruSeq Adapter, Index 7 (97% over 35bp)
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT443310.1981003441184092No Hit
TATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT294270.13149937574998147No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)