FastQCFastQC Report
Tue 13 Sep 2022
EGAF00002373102

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002373102
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6434050
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGAGTGATGGTTGAGGTAGTGTGGAGCTCCCGGGTGTGAGTGATGGTTG253440.3939043059970003No Hit
GTGAGTGATGGTTGAGGTAGTGTGGAGTACCCGGGTGTGAGTGATGGTTG225670.3507433109783107No Hit
GTGAGTGATGGTTGAGGTAGTGTGGAGCTCCCGGTGTGAGTGATGGTTGA79630.12376341495636498No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)