FastQCFastQC Report
Thu 5 Jan 2023
EGAF00002373131

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002373131
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22648726
Sequences flagged as poor quality0
Sequence length150
%GC32

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT910670.402084426294No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCCTATTATCTCGTATGC764670.3376216392922056TruSeq Adapter, Index 22 (97% over 37bp)
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT518030.2287236818530102No Hit
ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT423960.18718933683068972No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT305680.134965648840469No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)