FastQCFastQC Report
Tue 27 Sep 2022
EGAF00002373226

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002373226
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20373632
Sequences flagged as poor quality0
Sequence length150
%GC32

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1010690.49607747896889476No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA285900.1403284402113477No Hit
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG271510.13326538930319348Illumina Single End PCR Primer 1 (100% over 50bp)
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA250140.12277634149865865No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)