FastQCFastQC Report
Wed 14 Sep 2022
EGAF00002373227

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002373227
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16960018
Sequences flagged as poor quality0
Sequence length150
%GC31

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1100230.6487198303681047No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT585040.34495246408346975No Hit
ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT500560.29514119619448514No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT384610.226774523470435No Hit
TATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT278190.1640269485563046No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACCTTAATCTCGTATGC213200.12570741375392408TruSeq Adapter, Index 8 (97% over 37bp)
TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT182370.10752936700892653No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)