FastQCFastQC Report
Wed 15 Mar 2023
EGAF00002373290

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002373290
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16800085
Sequences flagged as poor quality0
Sequence length150
%GC27

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA522770.3111710446703097No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT388800.23142740051612837No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA198790.11832678227520872No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA174580.10391614090047759No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)