FastQCFastQC Report
Fri 10 Feb 2023
EGAF00002373307

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002373307
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences125344791
Sequences flagged as poor quality0
Sequence length150
%GC18

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA12735931.0160717408671573No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2901990.2315205902732727No Hit
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2334890.18627738587078582No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1650640.13168796140878325No Hit
CTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1292910.10314828320229119No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)