FastQCFastQC Report
Wed 15 Mar 2023
EGAF00002373317

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002373317
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40198664
Sequences flagged as poor quality0
Sequence length150
%GC14

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4875841.212935832892357No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1287960.32039870777795004No Hit
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA945080.23510234071460684No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA748830.1862823102777744No Hit
CTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA517930.1288425903905662No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)