FastQCFastQC Report
Wed 16 Nov 2022
EGAF00002395216

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002395216
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences131036208
Sequences flagged as poor quality0
Sequence length101
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT4167030.3180059972431437No Hit
CCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG1571070.11989586878155083No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)