FastQCFastQC Report
Fri 24 Mar 2023
EGAF00002396136

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002396136
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54947574
Sequences flagged as poor quality0
Sequence length150-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGA693910.12628583019880002No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGA617970.11246538382204099No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)