FastQCFastQC Report
Thu 23 Mar 2023
EGAF00002396157

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002396157
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62417342
Sequences flagged as poor quality0
Sequence length150-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATG875200.14021744149246215No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA790860.1267051711365729No Hit
GCTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGAT738010.1182379730299954No Hit
GTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGA641380.10275669861110075No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)