FastQCFastQC Report
Fri 6 Jan 2023
EGAF00002402987

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002402987
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24239458
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT977400.4032268378278095No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT865510.3570665647721991No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT514650.21231910383474745No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)