FastQCFastQC Report
Tue 27 Sep 2022
EGAF00002403040

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002403040
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32830526
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT810270.2468038434717738No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT808880.24638045701735026No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT402160.12249575288559189No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)