FastQCFastQC Report
Wed 8 May 2024
EGAF00002424142

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002424142
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2569151
Total Bases323.7 Mbp
Sequences flagged as poor quality0
Sequence length126
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTG26240.10213490760177193No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT26200.10197921414506193No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)