FastQCFastQC Report
Fri 15 Sep 2023
EGAF00002435189

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002435189
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17635467
Sequences flagged as poor quality0
Sequence length251
%GC45

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA4402312.496282066134115No Hit
CGGAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA1950111.1057886927519414No Hit
GGTAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA1913441.084995367573765No Hit
TGGAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA1793051.0167295257902724No Hit
GGCAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA1732550.9824236579615385No Hit
GGGAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA1646590.933680973687853No Hit
GGAAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA1643850.9321272864506508No Hit
GCGAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA1558460.8837078144854343No Hit
GTGAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA1543290.875105830767056No Hit
GAGAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA1409340.7991509382768259No Hit
AGGAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA1336860.7580519415788649No Hit
TGTAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA1251840.7098422740945844No Hit
GTTAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA1191260.6754910431348373No Hit
CGTAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA1153090.6538471592501633No Hit
TAGAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA1079860.6123228831989536No Hit
TTGAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA1077760.6111321010098569No Hit
TGAAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA1058410.6001598936960388No Hit
TTTAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA1054880.5981582455400812No Hit
GTAAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA1048550.5945688877986617No Hit
CAGAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA1014000.574977685592335No Hit
CGAAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA992280.5626615955222507No Hit
TCGAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA984900.5584768466862828No Hit
CGCAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA965560.5475103097638412No Hit
GATAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA958170.5433198905364968No Hit
TATAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA955430.5417662032992945No Hit
TGCAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA955070.5415620692097352No Hit
GCAAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA950180.5387892478265531No Hit
TTAAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA949460.5383809796474344No Hit
CTGAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA933810.5295068171429768No Hit
GAAAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA930360.5275505321180324No Hit
CCGAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA921470.5225095541841903No Hit
GCTAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA920510.5219651966120319No Hit
TAAAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA919920.5216306435208095No Hit
AGTAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA911090.5166236879352274No Hit
GTCAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA883440.5009450557787894No Hit
CATAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA874280.49575097727777784No Hit
CAAAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA837540.4749179593599648No Hit
TCAAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA814450.4618250256712793No Hit
AAGAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA809480.4590068411570842No Hit
ATGAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA791140.4486073433723077No Hit
AGAAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA787900.44677013656627296No Hit
GACAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA785010.44513139345842107No Hit
CTTAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA784100.4446153878431458No Hit
GCCAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA764370.4334277056570149No Hit
TCTAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA759600.4307229289703528No Hit
ATTAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA754960.42809186737158705No Hit
TTCAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA753770.42741709079776563No Hit
CGGAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA736810.4178001070229668No Hit
ACGAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA734240.41634281643916776No Hit
AGCAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA723370.41017910101274885No Hit
TACAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA719050.40772949193803604No Hit
CTAAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA715940.40596600021989776No Hit
GGTAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA708390.4016848547305269No Hit
AATAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA707310.4010724524618486No Hit
AAAAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA684460.38811560816620283No Hit
CCAAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA679820.3854845465674371No Hit
ATAAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA676160.3834091833235831No Hit
TGGAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA667790.37866306574132685No Hit
CACAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA648330.3676284841223655No Hit
GGCAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA632880.3588677294454408No Hit
CCTAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA617150.34994820380997No Hit
CTCAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA610740.34631348293753716No Hit
GGAAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA601730.34120446030717533No Hit
ACAAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA601650.3411590971761621No Hit
TCCAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA582480.33028895690712357No Hit
GCGAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA579620.3286672249734016No Hit
GTGAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA567170.32160758770947206No Hit
ACTAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA561850.3185909394970941No Hit
ATCAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA558140.3164872242963569No Hit
AACAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA550250.3120132855001798No Hit
CCCAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA517780.2936015247001965No Hit
GAGAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA514030.29147512793395264No Hit
AGGAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA501830.28455725045443936No Hit
TGTAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA450070.2552073046888977No Hit
CGTAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA440690.24988847757759974No Hit
GTTAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA438250.24850490208169707No Hit
TCAGAATGACTAAAGGCACTGAATATAAAAAAAATCTCCAGTATTACATT435120.2467300695808055No Hit
ACCAAACAGCCCGCCTGGAATGTGTGGTATCTGGAATAACAATTTCTGCA426130.24163238773319698No Hit
TAGAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA395850.22446244264470003No Hit
TTGAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA388000.22001118541402956No Hit
TGAAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA382110.21667132489318258No Hit
GTAAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA380230.21560529131437234No Hit
CAGAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA374670.2124525537089548No Hit
TCGAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA364630.20675948076679795No Hit
CGCAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA364190.20650998354622535No Hit
TTTAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA363940.20636822376180908No Hit
CGAAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA363620.2061867712377563No Hit
GATAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA352620.199949340723441No Hit
TGCAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA349590.198231212136316No Hit
GCAAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA345430.1958723293236295No Hit
CTGAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA344230.19519188235843143No Hit
CCGAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA342170.1940237817348415No Hit
TATAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA340720.19320157498522722No Hit
GAAAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA339300.19239637940974288No Hit
TTAAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA337090.19114322291550317No Hit
AGTAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA335060.18999213346604316No Hit
GCTAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA334370.1896008764610543No Hit
TAAAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA332600.18859721718738723No Hit
CATAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA322740.18300621129001007No Hit
GTCAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA321870.1825128872402415No Hit
CAAAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA301520.17097364078875826No Hit
AAGAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA298450.1692328306361266No Hit
TCAAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA291730.16542232763101766No Hit
ATGAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA290070.16448104266249372No Hit
GACAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA287950.16327891969064387No Hit
AGAAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA287500.1630237520786946No Hit
GCCAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA278000.15763688027087686No Hit
CTTAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA277410.15730232717965448No Hit
GGGGTCATCTGCTGAAATCACTTGTGATCTTGCTGAAGGAAGTACCGGCT277160.15716056739523823No Hit
TCTAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA273220.15492643319283805No Hit
ATTAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA272810.1546939471463954No Hit
TTCAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA272670.15461456166712229No Hit
ACGAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA268410.15219897494066928No Hit
TACAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA267370.15160925423749763No Hit
AGCAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA262320.14874570659228928No Hit
CTAAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA257780.14617134890729006No Hit
AATAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA257320.14591051090396415No Hit
AAAAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA249090.14124377880098102No Hit
CCAAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA246340.13968442117240218No Hit
ATAAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA245530.1392251194708935No Hit
CACAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA240010.13609506343098257No Hit
CCTAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA224960.12756112440912395No Hit
CTCAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA224410.1272492528834082No Hit
ACAAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA223910.1269657333145757No Hit
TCCAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA217500.12333101244214287No Hit
ACTAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA205330.11643014613675952No Hit
ATCAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA203590.11544349803722237No Hit
AACAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA201850.11445684993768522No Hit
CCCAAACAGCCCGCCTGGAATGTGTGGTGTCTGGAATAACAATTTCTGCA187630.10639355340008859No Hit
GGGGTCATCAGCTGTAATCACTTGTGATCTTGCTGAAGGAAGTACCGGCT177440.10061542458728197No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)