FastQCFastQC Report
Mon 18 Sep 2023
EGAF00002435217

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002435217
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17599206
Sequences flagged as poor quality0
Sequence length251
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC4858462.760613177662674No Hit
TGGTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC3442591.9561052924773992No Hit
GTGTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC3093601.7578065737738395No Hit
GGTTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC2927631.6635011829510944No Hit
CGGTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC2851101.6200162666429385No Hit
TTGTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC2745241.5598658257650941No Hit
AGGTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC2561711.4555827120837157No Hit
TGTTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC2328111.3228494512763815No Hit
GTTTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC2210301.2559089313461074No Hit
GCGTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC2205081.2529428884462175No Hit
GAGTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC2166731.2311521326587118No Hit
TAGTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC1978921.1244370910824044No Hit
GGCTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC1964931.1164878688277187No Hit
CTGTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC1878881.0675936175757021No Hit
ATGTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC1869741.0624002014636342No Hit
TCGTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC1816661.0322397499068992No Hit
TTTTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC1803121.0245462210056522No Hit
GGATCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC1685770.9578670765033378No Hit
CAGTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC1629840.926087233708157No Hit
AGTTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC1591650.9043873911129855No Hit
AAGTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC1481980.8420720798426928No Hit
CGTTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC1480120.8410152139818127No Hit
GTCTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC1460200.8296965215362557No Hit
GCTTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC1451570.8247928912247519No Hit
TGCTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC1446380.8218438945484244No Hit
CCGTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC1414000.8034453372498738No Hit
GATTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC1396830.7936892152975538No Hit
ACGTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC1357910.7715745812623592No Hit
TGATCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC1345760.764670860719512No Hit
GTATCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC1291340.7337490111769815No Hit
TATTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC1161070.6597286263937134No Hit
ATTTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC1118230.635386619146341No Hit
CGCTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC1099440.6247100011216415No Hit
TCTTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC1063400.6042318045484553No Hit
AGCTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC1057590.6009305192518345No Hit
TTATCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC1025420.5826512855182217No Hit
CATTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC996540.5662414543019725No Hit
GCCTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC990370.5627356143226007No Hit
GAATCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC988300.5615594248967822No Hit
TTCTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC984970.5596672940813353No Hit
CTTTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC984960.5596616120068144No Hit
AGATCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC980770.5572808227825733No Hit
GCATCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC975030.5540193120075986No Hit
GACTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC969810.5510532691077087No Hit
CGATCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC967880.5499566287251823No Hit
AATTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC948750.5390868201667735No Hit
TAATCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC895170.5086422648839953No Hit
TCATCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC848660.48221493628746664No Hit
ATATCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC848440.48208993064800765No Hit
CCTTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC815080.46313453004641236No Hit
ACTTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC801960.45567964827504154No Hit
CTATCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC801040.45515689741912224No Hit
TACTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC792360.45022485673501406No Hit
ATCTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC771530.4383890955080587No Hit
CAATCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC751750.4271499521057939No Hit
CACTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC732030.41594490115065424No Hit
CTCTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC706920.40167721202876994No Hit
CCATCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC702440.39913164264342377No Hit
TCCTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC676460.38436961303822453No Hit
AAATCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC675670.38392072915107645No Hit
AACTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC658270.37403391948477677No Hit
ACATCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC651480.37017579088511154No Hit
CCCTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC625430.35537398675826626No Hit
ACCTCCCTGCCACCCTCAGGTGCTCCATGAAAGGAGAAGCGATCGGTAAC580590.3298955646067215No Hit
TTTGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA431390.2451190127554618No Hit
TTAGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA366970.20851508869206942No Hit
TATGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA350780.199315810042794No Hit
ATTGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA348100.19779301407120298No Hit
TAAGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA295870.16811553884874125No Hit
ATAGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA294190.16716095032923645No Hit
GGGGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA292100.1659733967543763No Hit
AATGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA282590.16056974388503664No Hit
TGTGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA282000.16023450148830576No Hit
CTTGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA278810.15842191971615083No Hit
GTTGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA278770.15839919141806738No Hit
GTAGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA250100.14210868376675628No Hit
CATGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA249280.14164275365604562No Hit
CGTGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA249180.141585932910837No Hit
TCAGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA247260.1404949746028315No Hit
AAAGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA246250.13992108507622447No Hit
TCTGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA245710.1396142530520979No Hit
TTCGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA242190.13761416282075453No Hit
TTGGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA240190.13647774791658215No Hit
CTAGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA235160.1336196644325886No Hit
GGTGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA232310.13200027319414295No Hit
AGTGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA229660.13049452344611456No Hit
TGAGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA224740.1276989427818505No Hit
GATGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA218030.12388627077835215No Hit
CAAGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA211470.12015882989266674No Hit
CGGGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA207640.11798259535117663No Hit
ACAGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA205960.11702800683167183No Hit
ACTGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA204580.11624388054779289No Hit
ATCGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA204260.11606205416312532No Hit
TAGGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA202440.11502791660032843No Hit
GGAGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA200320.11382331680190572No Hit
ATGGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA199580.11340284328736194No Hit
TGGGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA197520.11223233593606438No Hit
GTGGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA196840.11184595486864579No Hit
GAAGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA196130.1114425275776646No Hit
TACGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA190730.10837420733639914No Hit
AGAGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA188040.10684572929028731No Hit
CGAGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCA178180.10124320381271745No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)