FastQCFastQC Report
Tue 13 Sep 2022
EGAF00002439852

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002439852
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10113276
Sequences flagged as poor quality0
Sequence length125
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGATTAGCACTACGCATCGGTTACAAACGAGGACCTGATGCACTTTGAC134770.1332604786025814No Hit
ATCGCGGATTAGCACTACGCATCGGTTACAAACGAGGACCTGATGCACTT118380.11705405844752977No Hit
CGTCGAACTTACATCCGATCATGCTGTCAAAGTGCATCAGGTCCTCGTTT117240.11592682727140048No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)