FastQCFastQC Report
Sun 2 Apr 2023
EGAF00002442743

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002442743
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35380418
Sequences flagged as poor quality0
Sequence length32-76
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2008180.5675964597139581No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)