FastQCFastQC Report
Fri 2 Sep 2022
EGAF00002443546

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002443546
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9421
Sequences flagged as poor quality0
Sequence length5-43359
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGTTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATT260.27597919541449956No Hit
TGTTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTC120.12737501326823053No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)