FastQCFastQC Report
Sat 11 May 2024
EGAF00002444197

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002444197
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32828273
Total Bases2.4 Gbp
Sequences flagged as poor quality0
Sequence length20-76
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2485320.7570669343465006No Hit
GTCCAATTGGGTGTGAGGAGTTCAGTTATATGTTTGGGATTTTTTAGGTA615860.1876004869339304No Hit
AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG502980.1532154920242073No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)