FastQCFastQC Report
Sat 11 May 2024
EGAF00002444220

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002444220
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22508746
Total Bases1.6 Gbp
Sequences flagged as poor quality0
Sequence length33-76
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG667230.2964314404720725No Hit
CTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTACCCAAATAAAG269020.11951798647512393No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)