FastQCFastQC Report
Wed 1 May 2024
EGAF00002444244

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002444244
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32791345
Total Bases2.4 Gbp
Sequences flagged as poor quality0
Sequence length32-76
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG826200.2519567282159363No Hit
CTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTACCCAAATAAAG361400.11021200868704838No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)