FastQCFastQC Report
Sat 11 May 2024
EGAF00002444291

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002444291
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27337699
Total Bases2 Gbp
Sequences flagged as poor quality0
Sequence length20-76
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1121080.41008572082090744No Hit
AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG442050.16169978314561148No Hit
GCTACCTTTGCACGGTTAGGGTACCGCGGCCGTTAAACATGTGTCACTGG350650.1282660987671274No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)