FastQCFastQC Report
Thu 9 May 2024
EGAF00002444309

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002444309
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40072788
Total Bases3 Gbp
Sequences flagged as poor quality0
Sequence length20-76
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1390710.3470459804294126No Hit
AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG452470.11291203397178154No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)