FastQCFastQC Report
Wed 8 May 2024
EGAF00002444403

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002444403
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19875413
Total Bases1.4 Gbp
Sequences flagged as poor quality0
Sequence length20-76
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG634740.3193594014876571No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG236220.11885036049313794No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)