FastQCFastQC Report
Fri 3 May 2024
EGAF00002444415

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002444415
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29080068
Total Bases2.1 Gbp
Sequences flagged as poor quality0
Sequence length20-76
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG916940.31531563131145357No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG324570.11161253130494743No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)