FastQCFastQC Report
Tue 7 May 2024
EGAF00002444418

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002444418
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25655383
Total Bases1.9 Gbp
Sequences flagged as poor quality0
Sequence length31-76
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG650250.25345558084242986No Hit
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT395190.1540378485092193No Hit
CTCGGCTCGTGCGTCGATGAAGAACGCAGCTAGCTGCGAGAATTAATGTG258930.1009261876932416No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)