FastQCFastQC Report
Thu 14 Sep 2023
EGAF00002446264

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002446264
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62560587
Sequences flagged as poor quality0
Sequence length76
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10873231.7380319657166898No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGG704800.11265878947075737No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGG679130.10855556710169616No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)