FastQCFastQC Report
Sat 13 May 2023
EGAF00002446273

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002446273
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45189656
Sequences flagged as poor quality0
Sequence length76
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1434830.31751292817984716No Hit
GGGGAGGGAGCGAGCGGCGCGCGCGGGGTGGGGCGGGGGAGGGCCGCGAG697420.15433177893631234No Hit
GTCCAGAGTCGCCGCCGCCGCCGGCCCCCCGGGTGCCCGGGCCCCCCTCG640020.14162975703997394No Hit
GGGGTGGGGCGGGGGAGGGCCGCGAGGGGGGTGCCCCGGGCGTGGGGGGG552760.12232002828257865No Hit
GGGGTGGGGAGGGAGCGAGCGGCGCGCGCGGGGTGGGGCGGGGGAGGGCC473740.10483372566500618No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)